MLOC_21781 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.928195.593096.24265.56685
LEAShoots from the seedlings (10 cm shoot stage)5.084833.334512.616492.92079
INF1Young developing inflorescences (5mm)3.281363.174652.897052.37584
INF2Developing inflorescences (1-1.5 cm)3.481283.651824.076093.55656
ROORoots from the seedlings (10 cm shoot stage)5.447875.149955.012835.4705
NODDeveloping tillers at six leaf stage, 3rd internode5.187154.949024.486513.9227
CAR5Developing grain, bracts removed (5 DPA)5.363125.428934.517434.31169
CAR15Developing grain, bracts removed (15 DPA)1.637171.723361.799753.51892



CDS Structure of MLOC_21781






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21781.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21781.4CUST_10013_PI427708080AvailableAvailablecontig_159874 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56860.1 -1 0.0 741 402/483 (83%) 13101.m06030 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT2G16405.1 -1 0.0 522 287/487 (59%) Transducin/WD40 repeat-like superfamily protein | chr2:7105915-7108787 REVERSE LENGTH=482