MLOC_21748 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.068987600.0771257
INF2Developing inflorescences (1-1.5 cm)0.063586800.07702110.129756
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.5105750.2799350.08820120.758775
CAR5Developing grain, bracts removed (5 DPA)210.233222.167163.161207.313
CAR15Developing grain, bracts removed (15 DPA)0.4146330.1327640.1737760.644166



CDS Structure of MLOC_21748






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21748.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377005NoneNoneNoneNone
MLOC_21748.1CUST_1974_PI427708080AvailableAvailablecontig_159836 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g02630.1 +2 3e-15 71 40/105 (38%) 13102.m00208 protein THION20 - Plant thionin family protein precursor, putative
TAIR PP10None-----