MLOC_21735 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4118712.548733.408781.68603
LEAShoots from the seedlings (10 cm shoot stage)3.221582.919422.498971.89287
INF1Young developing inflorescences (5mm)5.068196.210727.73623.59843
INF2Developing inflorescences (1-1.5 cm)6.288176.304195.997735.29029
ROORoots from the seedlings (10 cm shoot stage)1.265992.050621.581731.74156
NODDeveloping tillers at six leaf stage, 3rd internode2.691024.18825.0768910.9645
CAR5Developing grain, bracts removed (5 DPA)5.815075.448384.154043.8139
CAR15Developing grain, bracts removed (15 DPA)1.661.484890.4051132.52792



CDS Structure of MLOC_21735






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21735.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21735.1CUST_17601_PI427708080AvailableAvailablecontig_15983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g33500.2 -2 2e-14 74 35/39 (90%) 13109.m03330 protein transketolase, putative, expressed
TAIR PP10 AT5G50850.1 -2 3e-13 70 32/38 (84%) | Symbols: MAB1 | Transketolase family protein | chr5:20689671-20692976 FORWARD LENGTH=363