MLOC_21703 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.272725.91824.374728.9624
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.028336000.0353961
ROORoots from the seedlings (10 cm shoot stage)9.417776.10598.767837.55863
NODDeveloping tillers at six leaf stage, 3rd internode000.0100970.0214169
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_21703






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21703.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21703.1CUST_10003_PI427708080AvailableAvailablecontig_159793 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g22919.4 -1 2e-144 420 202/288 (70%) 13106.m02466 protein DEFL9 - Defensin and Defensin-like DEFL family, expressed
TAIR PP10 AT4G28850.1 -1 3e-87 272 136/262 (52%) | Symbols: XTH26, ATXTH26 | xyloglucan endotransglucosylase/hydrolase 26 | chr4:14244336-14245781 FORWARD LENGTH=292