MLOC_2170 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.569738.437918.483327.33264
LEAShoots from the seedlings (10 cm shoot stage)10.011910.04879.496178.27895
INF1Young developing inflorescences (5mm)8.960249.353939.766887.6453
INF2Developing inflorescences (1-1.5 cm)15.523711.471112.365614.0152
ROORoots from the seedlings (10 cm shoot stage)4.041256.254986.354627.01376
NODDeveloping tillers at six leaf stage, 3rd internode5.983276.23466.9481720.6133
CAR5Developing grain, bracts removed (5 DPA)5.241085.31455.190954.99715
CAR15Developing grain, bracts removed (15 DPA)3.980233.713693.140738.41737



CDS Structure of MLOC_2170






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2170.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249226.1NoneNoneNoneNone
MLOC_2170.2CUST_89_PI427708080AvailableAvailablecontig_119275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45860.1 +3 0.0 1288 669/853 (78%) 13106.m04841 protein molybdenum cofactor sulfurase, putative, expressed
TAIR PP10 AT1G16540.1 +3 0.0 871 472/859 (55%) | Symbols: SIR3, LOS5, ABA3, ATABA3, ACI2 | molybdenum cofactor sulfurase (LOS5) (ABA3) | chr1:5659465-5665201 FORWARD LENGTH=819