MLOC_21677 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.362912.788213.584516.1228
LEAShoots from the seedlings (10 cm shoot stage)0.5360224.1017317.21956.65641
INF1Young developing inflorescences (5mm)0.03722940.044765200.0419351
INF2Developing inflorescences (1-1.5 cm)000.2792640.352113
ROORoots from the seedlings (10 cm shoot stage)17.656110.06745.555712.1242
NODDeveloping tillers at six leaf stage, 3rd internode00.048464600.348256
CAR5Developing grain, bracts removed (5 DPA)0.8421770.3746840.8773450.784624
CAR15Developing grain, bracts removed (15 DPA)1.776582.361212.590446.34769



CDS Structure of MLOC_21677






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21677.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368682NoneNoneNoneNone
MLOC_21677.1CUST_1969_PI427708080AvailableAvailablecontig_159752 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42450.1 +2 3e-92 276 121/154 (79%) 13102.m04706 protein RIPER1 - Ripening-related family protein precursor, expressed
TAIR PP10None-----