- Predicted Gene MLOC_21670
MLOC_21670 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21670_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21670_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 3.4499 | 2.10638 | 3.76853 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 145.365 | 207.387 | 131.233 | 138.867 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.63954 | 0.792774 | 1.15656 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.504109 | 0 | 0 | 0.609221 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.40588 | 0.728229 | 4.53857 | 1.91337 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.590672 | 1.44577 | 0.839466 | 4.51971 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.592524 | 5.52286 | 3.074 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.89149 | 2.03647 | 2.94671 | 4.97381 |
CDS Structure of MLOC_21670
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21670.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g38229.1 |
+2 |
5e-17 |
76 |
46/54 (85%) |
13110.m07791 protein photosystem I P700 chlorophyll a apoprotein A1, putative |
TAIR PP10 |
ATCG00350.1 |
+2 |
1e-16 |
74 |
44/54 (81%) |
| Symbols: PSAA | Photosystem I, PsaA/PsaB protein | chrC:39605-41857 REVERSE LENGTH=750 |