- Predicted Gene MLOC_21653
MLOC_21653 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.68885 | 3.08173 | 2.22124 | 3.27363 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0963 | 13.4129 | 11.2822 | 11.6002 |
| INF1 | Young developing inflorescences (5mm) | 2.21056 | 2.09612 | 3.46616 | 2.27511 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.14861 | 2.06531 | 1.68549 | 1.96475 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.1215 | 13.5247 | 19.0529 | 17.7426 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.8209 | 13.1422 | 19.5385 | 53.5137 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.03408 | 3.88819 | 2.92188 | 4.05971 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.69981 | 5.72586 | 3.73504 | 11.8643 |
CDS Structure of MLOC_21653
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21653.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g47870.2 |
+2 |
4e-64 |
213 |
99/119 (83%) |
13104.m04863 protein PINHEAD, putative, expressed |
| TAIR PP10 |
AT1G48410.1 |
+2 |
6e-47 |
164 |
77/119 (65%) |
| Symbols: AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr1:17886285-17891892 REVERSE LENGTH=1048 |