- Predicted Gene MLOC_21595
MLOC_21595 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.7602 | 23.2919 | 21.653 | 21.2114 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 25.1068 | 23.8638 | 17.9925 | 20.4663 |
| INF1 | Young developing inflorescences (5mm) | 23.2786 | 24.8489 | 25.6194 | 21.6847 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.2599 | 20.755 | 21.372 | 25.3756 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.3036 | 19.5215 | 15.4817 | 24.5649 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.1036 | 23.8821 | 19.2478 | 89.3096 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.2043 | 23.6091 | 28.0052 | 27.5131 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 30.0699 | 26.5546 | 28.1713 | 68.6956 |
CDS Structure of MLOC_21595
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21595.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g64400.1 |
+2 |
0.0 |
847 |
541/844 (64%) |
13103.m07157 protein oxidoreductase/ transition metal ion binding protein, putative, expressed |
| TAIR PP10 |
AT5G23890.1 |
+2 |
2e-169 |
526 |
357/760 (47%) |
LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:8058789-8063005 FORWARD LENGTH=946 |