- Predicted Gene MLOC_21559
MLOC_21559 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21559_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21559_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 17.6105 | 12.0192 | 13.6262 | 14.584 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0949 | 10.7297 | 13.5281 | 9.76428 |
INF1 | Young developing inflorescences (5mm) | 34.3614 | 40.498 | 39.0353 | 33.7553 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.25156 | 5.88698 | 6.57323 | 6.64243 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.6938 | 11.7926 | 6.42495 | 14.8619 |
NOD | Developing tillers at six leaf stage, 3rd internode | 27.5623 | 13.6234 | 9.39184 | 39.6415 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.9145 | 9.71395 | 9.97593 | 11.588 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.38393 | 2.59309 | 2.6776 | 6.31154 |
CDS Structure of MLOC_21559
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21559.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g18070.1 |
+1 |
0.0 |
652 |
339/411 (82%) |
13103.m02163 protein omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT5G05580.1 |
+1 |
0.0 |
554 |
276/394 (70%) |
| Symbols: FAD8 | fatty acid desaturase 8 | chr5:1664331-1666345 FORWARD LENGTH=435 |