MLOC_21550 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.71871.855490.8483561.61872
LEAShoots from the seedlings (10 cm shoot stage)1.589874.319221.572761.95832
INF1Young developing inflorescences (5mm)2.016211.422962.284531.67052
INF2Developing inflorescences (1-1.5 cm)10.065110.649614.817813.5522
ROORoots from the seedlings (10 cm shoot stage)3.199211.857952.810642.47211
NODDeveloping tillers at six leaf stage, 3rd internode1.154420.7185790.8453161.88597
CAR5Developing grain, bracts removed (5 DPA)14.038915.194716.182915.9086
CAR15Developing grain, bracts removed (15 DPA)3.364864.313045.4126910.0465



CDS Structure of MLOC_21550






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21550.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21550.1CUST_3084_PI427708083AvailableAvailablecontig_1596097 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g20480.1 -3 2e-19 86 36/50 (72%) 13108.m02133 protein OsFBO20 - F-box and other domain containing protein
TAIR PP10None-----