MLOC_21527 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains114.5497.6831126.69390.4851
LEAShoots from the seedlings (10 cm shoot stage)965.835719.366355.558505.342
INF1Young developing inflorescences (5mm)0.5384210.23666800.339047
INF2Developing inflorescences (1-1.5 cm)3.943053.834333.290253.38191
ROORoots from the seedlings (10 cm shoot stage)4.5807468.636811.51347.9972
NODDeveloping tillers at six leaf stage, 3rd internode103.7976.384414.4705162.975
CAR5Developing grain, bracts removed (5 DPA)164.414197.267190.001136.556
CAR15Developing grain, bracts removed (15 DPA)12.00265.7165634.689224.8241



CDS Structure of MLOC_21527






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21527.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21527.1CUST_17596_PI427708080AvailableAvailablecontig_1595946 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g24070.1 +2 7e-13 66 27/46 (59%) 13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----