MLOC_21503 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.609326.317286.66586.20236
LEAShoots from the seedlings (10 cm shoot stage)9.130678.881479.896647.66526
INF1Young developing inflorescences (5mm)7.168838.329258.011446.98258
INF2Developing inflorescences (1-1.5 cm)8.051377.665398.046469.24529
ROORoots from the seedlings (10 cm shoot stage)5.640895.595396.018596.63355
NODDeveloping tillers at six leaf stage, 3rd internode8.525579.3657913.181830.3801
CAR5Developing grain, bracts removed (5 DPA)5.091524.916185.817685.16768
CAR15Developing grain, bracts removed (15 DPA)1.109741.100411.3152.58892



CDS Structure of MLOC_21503






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21503.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251723.1NoneNoneNoneNone
MLOC_21503.1CUST_17972_PI427708080AvailableAvailablecontig_159565 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g01240.1 -3 0.0 810 501/681 (74%) 13112.m00033 protein mitochondrial substrate carrier family protein, putative, expressed
TAIR PP10 AT2G35800.1 -3 0.0 706 416/613 (68%) mitochondrial substrate carrier family protein | chr2:15044437-15048352 FORWARD LENGTH=823