- Predicted Gene MLOC_21502
MLOC_21502 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21502_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21502_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.704348 | 0.781033 | 0.695527 | 0.417389 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.150174 | 0.0758429 | 0.438283 | 0.139573 |
INF1 | Young developing inflorescences (5mm) | 6.00168 | 6.25661 | 6.6143 | 2.84688 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.28834 | 6.95923 | 6.19699 | 4.27287 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.28903 | 0.714246 | 1.36201 | 0.569375 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0631897 | 0.167758 | 0.532942 | 0.589368 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.77351 | 2.50245 | 1.72045 | 1.13662 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.50665 | 0.441834 | 0.201322 | 0.623312 |
CDS Structure of MLOC_21502
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21502.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g01240.1 |
+2 |
1e-99 |
324 |
163/292 (56%) |
13111.m00032 protein IBR domain containing protein |
TAIR PP10 |
AT5G60250.1 |
+2 |
5e-83 |
281 |
127/296 (43%) |
zinc finger (C3HC4-type RING finger) family protein | chr5:24252226-24254710 FORWARD LENGTH=655 |