MLOC_21451 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.179929.171235.289331.1084
LEAShoots from the seedlings (10 cm shoot stage)26.609334.144126.245925.7591
INF1Young developing inflorescences (5mm)10.832711.62114.093810.8532
INF2Developing inflorescences (1-1.5 cm)17.217116.481420.410719.8568
ROORoots from the seedlings (10 cm shoot stage)49.156546.168147.64259.9222
NODDeveloping tillers at six leaf stage, 3rd internode56.370647.005333.0936153.46
CAR5Developing grain, bracts removed (5 DPA)33.974934.396537.61135.6658
CAR15Developing grain, bracts removed (15 DPA)7.448489.048558.4229619.5929



CDS Structure of MLOC_21451






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21451.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252216.1NoneNoneNoneNone
MLOC_21451.2CUST_1951_PI427708080AvailableAvailablecontig_159523 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08270.1 +1 0.0 681 348/394 (88%) 13101.m00860 protein aminotransferase, classes I and II, domain containing protein, expressed
TAIR PP10 AT1G80360.1 +1 0.0 533 266/394 (68%) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:30208736-30210643 REVERSE LENGTH=394