MLOC_21372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.436960.6457610.9539880.533093
LEAShoots from the seedlings (10 cm shoot stage)0.8104040.7760191.200090.700449
INF1Young developing inflorescences (5mm)1.087730.8729261.652740.758213
INF2Developing inflorescences (1-1.5 cm)1.696031.564432.187021.62244
ROORoots from the seedlings (10 cm shoot stage)0.1846780.2471840.764760.284188
NODDeveloping tillers at six leaf stage, 3rd internode0.4042250.3954660.6240751.23316
CAR5Developing grain, bracts removed (5 DPA)0.5399650.7784920.6214240.541921
CAR15Developing grain, bracts removed (15 DPA)0.2618310.3749420.1295780.50653



CDS Structure of MLOC_21372






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21372.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21372.4CUST_9973_PI427708080AvailableAvailablecontig_1594632 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56830.1 +1 2e-58 189 107/259 (41%) 13102.m06530 protein transposon protein, putative, CACTA, En/Spm sub-class
TAIR PP10None-----