MLOC_21344 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.380626.864498.591933.46572
LEAShoots from the seedlings (10 cm shoot stage)8.252234.120084.625873.22424
INF1Young developing inflorescences (5mm)8.337496.8287412.14763.97945
INF2Developing inflorescences (1-1.5 cm)10.991910.28988.958896.99045
ROORoots from the seedlings (10 cm shoot stage)2.250375.058694.294322.78352
NODDeveloping tillers at six leaf stage, 3rd internode3.781716.336854.5269212.3392
CAR5Developing grain, bracts removed (5 DPA)7.613398.716597.878554.36011
CAR15Developing grain, bracts removed (15 DPA)3.621262.588133.992714.23046



CDS Structure of MLOC_21344






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21344.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251699.1NoneNoneNoneNone
MLOC_21344.2CUST_159_PI427708083AvailableAvailablecontig_159440 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g67870.1 -1 2e-19 86 40/48 (83%) 13101.m07381 protein expressed protein
TAIR PP10 AT2G19880.2 -1 2e-21 89 40/51 (78%) Nucleotide-diphospho-sugar transferases superfamily protein | chr2:8581578-8585118 FORWARD LENGTH=520