- Predicted Gene MLOC_21341
MLOC_21341 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.29768 | 2.10979 | 3.4319 | 1.42811 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.7976 | 19.8445 | 13.077 | 9.34907 |
| INF1 | Young developing inflorescences (5mm) | 5.5463 | 3.23075 | 4.59253 | 2.63627 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.39834 | 3.05784 | 3.9808 | 2.85413 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.02493 | 2.20399 | 1.96433 | 1.76802 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.99317 | 7.51876 | 10.8504 | 19.902 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.29666 | 2.3424 | 3.15427 | 2.07678 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.672378 | 0.7031 | 0.52255 | 1.029 |
CDS Structure of MLOC_21341
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21341.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g28540.2 |
-3 |
7e-69 |
232 |
115/142 (81%) |
13101.m02960 protein stress regulated protein, putative, expressed |
| TAIR PP10 |
AT5G27290.2 |
-3 |
3e-53 |
186 |
85/142 (60%) |
unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 199 Blast hits to 194 proteins in 57 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr5:9618787-9620473 REVERSE LENGTH=262 |