- Predicted Gene MLOC_21289
MLOC_21289 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.92829 | 5.25 | 6.15962 | 5.1625 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.0672 | 46.2634 | 41.7202 | 29.3716 |
| INF1 | Young developing inflorescences (5mm) | 0.940072 | 1.35213 | 1.29008 | 0.821286 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.00622 | 2.18111 | 2.14357 | 1.96175 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.22798 | 10.7936 | 4.49735 | 9.71155 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.46483 | 2.85477 | 4.50664 | 9.11703 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.93365 | 4.35309 | 4.47345 | 3.40529 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.29639 | 2.33224 | 2.34482 | 4.29982 |
CDS Structure of MLOC_21289
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21289.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g14980.1 |
+1 |
0.0 |
702 |
367/443 (83%) |
13102.m01669 protein calcium-binding EF hand family protein, putative, expressed |
| TAIR PP10 |
AT1G53210.1 |
+1 |
2e-176 |
513 |
268/450 (60%) |
sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585 |