- Predicted Gene MLOC_21288
MLOC_21288 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.89112 | 2.18267 | 2.15394 | 2.54061 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.8379 | 16.2685 | 8.22079 | 11.4681 |
| INF1 | Young developing inflorescences (5mm) | 0.90803 | 0.524804 | 0.56529 | 0.700843 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.22756 | 0.718173 | 1.34723 | 1.48753 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.40211 | 3.0396 | 1.53696 | 4.15101 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.304451 | 0.472226 | 0.889758 | 1.75831 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.96856 | 3.18082 | 2.75325 | 3.93441 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.39053 | 0.991759 | 1.70961 | 4.06712 |
CDS Structure of MLOC_21288
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21288.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g14980.1 |
+3 |
3e-30 |
115 |
62/83 (75%) |
13102.m01669 protein calcium-binding EF hand family protein, putative, expressed |
| TAIR PP10 |
AT1G53210.1 |
+3 |
3e-26 |
103 |
49/58 (84%) |
sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585 |