MLOC_21284 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.787875.949998.032055.54879
LEAShoots from the seedlings (10 cm shoot stage)4.493433.007892.648122.61683
INF1Young developing inflorescences (5mm)6.144617.215245.507724.27157
INF2Developing inflorescences (1-1.5 cm)4.40886.641636.146325.06563
ROORoots from the seedlings (10 cm shoot stage)8.853575.787485.150366.38429
NODDeveloping tillers at six leaf stage, 3rd internode2.316532.847191.98827.80771
CAR5Developing grain, bracts removed (5 DPA)9.474349.049838.715057.05233
CAR15Developing grain, bracts removed (15 DPA)1.976512.478091.801283.67388



CDS Structure of MLOC_21284






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21284.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21284.2CUST_9967_PI427708080AvailableAvailablecontig_1593995 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43220.1 -3 9e-120 353 168/202 (83%) 13101.m04460 protein chitinase domain-containing protein 1 precursor, putative, expressed
TAIR PP10 AT4G01040.1 -3 4e-78 251 118/203 (58%) Glycosyl hydrolase superfamily protein | chr4:453383-455407 FORWARD LENGTH=430