- Predicted Gene MLOC_21279
MLOC_21279 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21279_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21279_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 37.5837 | 32.7423 | 33.7572 | 35.882 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.788 | 21.9658 | 21.5985 | 20.8878 |
INF1 | Young developing inflorescences (5mm) | 27.6901 | 33.3833 | 36.088 | 28.8092 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.6363 | 28.1199 | 26.0291 | 30.9099 |
ROO | Roots from the seedlings (10 cm shoot stage) | 32.86 | 27.8227 | 29.3018 | 37.3685 |
NOD | Developing tillers at six leaf stage, 3rd internode | 33.1932 | 43.7661 | 57.1114 | 158.445 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.6642 | 29.5823 | 30.5302 | 30.3653 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.93741 | 6.07727 | 6.79389 | 15.9401 |
CDS Structure of MLOC_21279
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21279.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g16940.1 |
+3 |
2e-155 |
447 |
235/307 (77%) |
13101.m01898 protein MazG nucleotide pyrophosphohydrolase domain containing protein, expressed |
TAIR PP10 |
AT1G31860.1 |
+3 |
3e-114 |
340 |
165/236 (70%) |
| Symbols: AT-IE, HISN2 | histidine biosynthesis bifunctional protein (HISIE) | chr1:11434250-11436530 REVERSE LENGTH=281 |