MLOC_21264 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03238670.06171680.02218450.0491602
LEAShoots from the seedlings (10 cm shoot stage)13.336824.989318.720715.6191
INF1Young developing inflorescences (5mm)0.04274720.09047340.01739460.0461378
INF2Developing inflorescences (1-1.5 cm)0.02634350.02480930.03441520.0296398
ROORoots from the seedlings (10 cm shoot stage)0.2469370.2306380.4745510.294142
NODDeveloping tillers at six leaf stage, 3rd internode6.5846910.095514.660132.655
CAR5Developing grain, bracts removed (5 DPA)2.027842.25832.153152.01965
CAR15Developing grain, bracts removed (15 DPA)0.6018591.046450.600431.75413



CDS Structure of MLOC_21264






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21264.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368530NoneNoneNoneNone
MLOC_21264.1CUST_1942_PI427708080AvailableAvailablecontig_159386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g02210.1 -3 0.0 759 376/550 (68%) 13110.m00119 protein peptide transporter PTR2, putative
TAIR PP10 AT2G02040.1 -3 0.0 563 281/579 (49%) | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | peptide transporter 2 | chr2:487542-489707 FORWARD LENGTH=585