MLOC_21237 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.840731.759973.798392.36194
LEAShoots from the seedlings (10 cm shoot stage)1.989941.472433.25661.87621
INF1Young developing inflorescences (5mm)1.30041.189311.421610.997805
INF2Developing inflorescences (1-1.5 cm)0.8887021.05851.012011.00105
ROORoots from the seedlings (10 cm shoot stage)3.572821.490071.034362.39429
NODDeveloping tillers at six leaf stage, 3rd internode2.081732.695443.193448.51841
CAR5Developing grain, bracts removed (5 DPA)1.234131.081920.9581320.980239
CAR15Developing grain, bracts removed (15 DPA)0.1316940.1981540.2853880.290499



CDS Structure of MLOC_21237






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21237.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21237.2CUST_11689_PI427708083AvailableAvailablecontig_1593759 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52900.2 -2 4e-29 112 54/63 (86%) 13102.m06031 protein glutaredoxin 2, putative, expressed
TAIR PP10 AT4G08280.1 -2 2e-21 90 44/61 (72%) Thioredoxin superfamily protein | chr4:5230345-5231196 FORWARD LENGTH=126