MLOC_21198 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.45320.9957770.6000140.79103
LEAShoots from the seedlings (10 cm shoot stage)1.173320.726840.1036960.600665
INF1Young developing inflorescences (5mm)0.5080650.196510.08011890.242549
INF2Developing inflorescences (1-1.5 cm)0.7821350.3064220.3641890.529338
ROORoots from the seedlings (10 cm shoot stage)0.7709780.7777840.6488750.968577
NODDeveloping tillers at six leaf stage, 3rd internode0.056275300.1377890.131458
CAR5Developing grain, bracts removed (5 DPA)1.012520.8101180.4170880.766173
CAR15Developing grain, bracts removed (15 DPA)4418.583404.33839.18994.47



CDS Structure of MLOC_21198






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21198.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21198.1CUST_9960_PI427708080AvailableAvailablecontig_1593592 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g31070.1 +2 4e-14 69 39/115 (34%) 13106.m03216 protein PROLM24 - Prolamin precursor, expressed
TAIR PP10None-----