MLOC_21186 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.645510.929211.042115.6487
LEAShoots from the seedlings (10 cm shoot stage)6.550270.8719266.916924.07791
INF1Young developing inflorescences (5mm)26.108824.912722.978122.9529
INF2Developing inflorescences (1-1.5 cm)16.774217.116219.105721.7652
ROORoots from the seedlings (10 cm shoot stage)23.028711.855811.677915.5012
NODDeveloping tillers at six leaf stage, 3rd internode2.087883.7365410.287814.835
CAR5Developing grain, bracts removed (5 DPA)7.633127.546636.954288.05737
CAR15Developing grain, bracts removed (15 DPA)1.200110.6174870.9531242.57539



CDS Structure of MLOC_21186






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21186.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21186.1CUST_11685_PI427708083AvailableAvailablecontig_1593519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 -1 4e-37 127 65/66 (98%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G65360.1 -1 2e-37 127 65/66 (98%) Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136