MLOC_21159 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3053890.3502830.1609570.270027
LEAShoots from the seedlings (10 cm shoot stage)0.255420.9432162.038620.77303
INF1Young developing inflorescences (5mm)1.467531.849732.779731.56996
INF2Developing inflorescences (1-1.5 cm)0.2478420.2090490.5015670.292115
ROORoots from the seedlings (10 cm shoot stage)00.18460200.445341
NODDeveloping tillers at six leaf stage, 3rd internode0.138840.1271430.1672580.359456
CAR5Developing grain, bracts removed (5 DPA)0.95680.4857820.7180070.619599
CAR15Developing grain, bracts removed (15 DPA)0.185230.03496470.04464340.230714



CDS Structure of MLOC_21159






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21159.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21159.1CUST_9952_PI427708080AvailableAvailablecontig_1593371 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g26820.1 +1 2e-21 94 47/91 (52%) 13103.m03134 protein LTPL52 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----