- Predicted Gene MLOC_21100
MLOC_21100 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21100_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21100_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 31.7248 | 17.3204 | 19.4916 | 19.924 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.2915 | 6.38306 | 12.5935 | 9.29922 |
INF1 | Young developing inflorescences (5mm) | 1.89633 | 1.01631 | 0.324314 | 0.931354 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.1188 | 3.63663 | 3.57057 | 2.86333 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.85135 | 6.05996 | 2.63093 | 5.90282 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.26163 | 2.63759 | 1.04518 | 6.34211 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.3207 | 28.9963 | 28.5178 | 27.02 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.416024 | 0.274214 | 0.369285 | 0.832014 |
CDS Structure of MLOC_21100
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21100.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g44360.1 |
+2 |
8e-47 |
164 |
78/119 (66%) |
13108.m04811 protein male sterility protein 2, putative, expressed |
TAIR PP10 |
AT4G33790.1 |
+2 |
4e-24 |
100 |
44/90 (49%) |
| Symbols: CER4, G7, FAR3 | Jojoba acyl CoA reductase-related male sterility protein | chr4:16204325-16207891 REVERSE LENGTH=493 |