MLOC_211 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_211_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_211_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.455143 | 0.468622 | 0.224328 | 0.443971 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.19718 | 0 | 0.157459 | 0.156041 |
INF1 | Young developing inflorescences (5mm) | 0.129768 | 0.380592 | 0.0405829 | 0.197183 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.101375 | 0.064704 | 0.278871 | 0.167245 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.761358 | 0.714901 | 0.894085 | 0.904408 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.494694 | 0.364526 | 0.460424 | 1.07107 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.28279 | 0.114831 | 0.155066 | 0.196216 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0572179 | 0.166103 | 0.0413841 | 0.296034 |
CDS Structure of MLOC_211
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_211.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g43080.1 |
+3 |
4e-88 |
272 |
139/201 (69%) |
13101.m04442 protein exonuclease, putative, expressed |
TAIR PP10 |
AT3G15140.1 |
+3 |
4e-14 |
73 |
49/180 (27%) |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337 |