- Predicted Gene MLOC_21047
MLOC_21047 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21047_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21047_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.82463 | 14.6967 | 14.299 | 11.3689 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.849 | 15.8604 | 12.1085 | 11.8488 |
INF1 | Young developing inflorescences (5mm) | 19.365 | 19.7178 | 23.273 | 15.1595 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.9299 | 27.2496 | 28.5604 | 27.2985 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.91553 | 11.7793 | 10.2379 | 11.0105 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.01962 | 6.88159 | 8.15473 | 24.567 |
CAR5 | Developing grain, bracts removed (5 DPA) | 21.664 | 23.3555 | 22.8129 | 18.9869 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.056 | 8.71916 | 9.13472 | 16.7467 |
CDS Structure of MLOC_21047
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21047.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g13400.2 |
+2 |
0.0 |
647 |
322/454 (71%) |
13102.m01487 protein expressed protein |
TAIR PP10 |
AT4G32850.7 |
+2 |
5e-165 |
489 |
231/327 (71%) |
| Symbols: nPAP | nuclear poly(a) polymerase | chr4:15850134-15853906 FORWARD LENGTH=716 |