MLOC_21037 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.572568.208276.76276.0652
LEAShoots from the seedlings (10 cm shoot stage)7.029714.284854.045434.19241
INF1Young developing inflorescences (5mm)20.497517.674217.426313.8329
INF2Developing inflorescences (1-1.5 cm)17.985117.358717.411916.9599
ROORoots from the seedlings (10 cm shoot stage)2.047753.87942.696653.75464
NODDeveloping tillers at six leaf stage, 3rd internode1.754291.562812.451875.42269
CAR5Developing grain, bracts removed (5 DPA)9.185958.3166210.70267.86381
CAR15Developing grain, bracts removed (15 DPA)6.269354.801744.7212110.9172



CDS Structure of MLOC_21037






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21037.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21037.2CUST_9943_PI427708080AvailableAvailablecontig_1592884 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53760.1 +3 0.0 781 399/418 (95%) 13103.m05878 protein ATP-dependent RNA helicase DHX36, putative, expressed
TAIR PP10 AT5G04895.1 +3 0.0 690 347/418 (83%) DEA(D/H)-box RNA helicase family protein | chr5:1428796-1434516 FORWARD LENGTH=1161