MLOC_21022 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.471322.731431.340792.53249
LEAShoots from the seedlings (10 cm shoot stage)1.807050.433282.035261.13656
INF1Young developing inflorescences (5mm)1.293262.439742.39131.86087
INF2Developing inflorescences (1-1.5 cm)0.9340741.14160.3709831.02337
ROORoots from the seedlings (10 cm shoot stage)32.206612.804836.462319.3666
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.496021.837181.441921.59722
CAR15Developing grain, bracts removed (15 DPA)0.4565870.326661.153271.43257



CDS Structure of MLOC_21022






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21022.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21022.2NoneAvailableAvailablecontig_159285 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01270.2 -1 7e-47 158 87/95 (92%) 13103.m00043 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 -1 8e-15 72 46/93 (49%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273