- Predicted Gene MLOC_21006
MLOC_21006 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21006_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21006_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.7097 | 16.1531 | 15.0957 | 16.3167 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.2377 | 14.0202 | 21.3698 | 13.3818 |
INF1 | Young developing inflorescences (5mm) | 25.7154 | 30.3483 | 31.9877 | 22.8641 |
INF2 | Developing inflorescences (1-1.5 cm) | 30.5507 | 28.3871 | 31.3628 | 30.7913 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.1331 | 17.3389 | 14.8848 | 19.7792 |
NOD | Developing tillers at six leaf stage, 3rd internode | 23.6738 | 33.6967 | 36.5997 | 111.342 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.5104 | 18.4703 | 17.5093 | 15.8377 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.1834 | 9.99759 | 8.31569 | 21.7883 |
CDS Structure of MLOC_21006
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21006.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g09120.1 |
-3 |
1e-57 |
196 |
93/124 (75%) |
13112.m00966 protein mRNA-capping enzyme, putative, expressed |
TAIR PP10 |
AT5G01290.1 |
-3 |
5e-35 |
132 |
64/108 (59%) |
mRNA capping enzyme family protein | chr5:117520-121392 FORWARD LENGTH=657 |