- Predicted Gene MLOC_20963
MLOC_20963 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20963_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20963_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 152.791 | 114.746 | 105.07 | 115.091 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 74.0049 | 81.7371 | 100.438 | 66.05 |
INF1 | Young developing inflorescences (5mm) | 129.382 | 136.882 | 144.419 | 114.053 |
INF2 | Developing inflorescences (1-1.5 cm) | 94.8513 | 123.386 | 118.391 | 121.081 |
ROO | Roots from the seedlings (10 cm shoot stage) | 138.581 | 138.763 | 159.034 | 151.794 |
NOD | Developing tillers at six leaf stage, 3rd internode | 83.4914 | 75.1794 | 105.441 | 229.312 |
CAR5 | Developing grain, bracts removed (5 DPA) | 56.9659 | 65.339 | 56.8286 | 58.4183 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.1578 | 10.0579 | 11.3708 | 24.4179 |
CDS Structure of MLOC_20963
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20963.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g55030.1 |
-3 |
8e-65 |
204 |
100/117 (85%) |
13101.m05788 protein DNA-binding protein-related, putative, expressed |
TAIR PP10 |
AT1G23750.1 |
-3 |
6e-50 |
165 |
80/116 (69%) |
Nucleic acid-binding, OB-fold-like protein | chr1:8400638-8401171 FORWARD LENGTH=137 |