- Predicted Gene MLOC_20953
MLOC_20953 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.4319 | 28.5681 | 34.5611 | 22.2152 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.3402 | 28.7267 | 35.0305 | 20.194 |
| INF1 | Young developing inflorescences (5mm) | 25.0933 | 29.7474 | 32.1356 | 16.9352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.0768 | 28.1603 | 23.4888 | 22.0558 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 44.1618 | 31.0899 | 25.8181 | 29.4303 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 33.4391 | 27.4366 | 26.3542 | 63.7167 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.2495 | 26.5832 | 27.3354 | 19.141 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.7718 | 14.6606 | 17.519 | 27.2195 |
CDS Structure of MLOC_20953
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20953.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g46160.1 |
-3 |
2e-64 |
213 |
105/123 (85%) |
13107.m04859 protein MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
| TAIR PP10 |
AT5G19000.1 |
-3 |
9e-49 |
171 |
80/123 (65%) |
| Symbols: ATBPM1, BPM1 | BTB-POZ and MATH domain 1 | chr5:6342563-6344641 FORWARD LENGTH=407 |