MLOC_20952 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0946026000.0799808
LEAShoots from the seedlings (10 cm shoot stage)000.1305490.161382
INF1Young developing inflorescences (5mm)0000.031928
INF2Developing inflorescences (1-1.5 cm)0.06850650.06289850.09004510.175281
ROORoots from the seedlings (10 cm shoot stage)00.08594780.2734720.268081
NODDeveloping tillers at six leaf stage, 3rd internode0.06904670.09166900.428311
CAR5Developing grain, bracts removed (5 DPA)0.1712470.153090.09191960.128371
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_20952






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20952.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20952.1CUST_9929_PI427708080AvailableAvailablecontig_159249 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46620.1 +2 2e-25 102 51/106 (48%) 13106.m04928 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----