MLOC_20884 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.700521.763524.645921.4175
LEAShoots from the seedlings (10 cm shoot stage)27.963716.27829.287518.8761
INF1Young developing inflorescences (5mm)8.009258.566068.626776.11751
INF2Developing inflorescences (1-1.5 cm)4.614176.410367.166895.69487
ROORoots from the seedlings (10 cm shoot stage)35.554529.912624.678831.023
NODDeveloping tillers at six leaf stage, 3rd internode51.234854.137230.1104143.823
CAR5Developing grain, bracts removed (5 DPA)25.389626.62623.797121.7294
CAR15Developing grain, bracts removed (15 DPA)15.590418.064613.442832.4001



CDS Structure of MLOC_20884






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365087
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365087CUST_21026_PI427708080NoneNoneNone
MLOC_20884.1NoneAvailableAvailablecontig_159216 (Mapped)
MLOC_26961.1NoneAvailableNonecontig_179337 (Mapped)
MLOC_29579.1NoneAvailableNonecontig_20179 (Not mapped)
MLOC_61615.1NoneAvailableNonecontig_45684 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----