MLOC_20858 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains63.382649.251847.33180
LEAShoots from the seedlings (10 cm shoot stage)39.91121.331126.3220
INF1Young developing inflorescences (5mm)48.473848.001753.99680
INF2Developing inflorescences (1-1.5 cm)37.839142.988142.27490
ROORoots from the seedlings (10 cm shoot stage)31.811740.370329.67950
NODDeveloping tillers at six leaf stage, 3rd internode76.9392134.53122.1320
CAR5Developing grain, bracts removed (5 DPA)35.329736.349836.70630
CAR15Developing grain, bracts removed (15 DPA)26.678524.625428.11150



CDS Structure of MLOC_20858






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364106
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364106CUST_20835_PI427708080NoneNoneNone
MLOC_20858.1NoneAvailableNonecontig_1592035 (Mapped)
MLOC_57227.1NoneAvailableAvailablecontig_41536 (Mapped)
MLOC_59455.1NoneAvailableNonecontig_43612 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----