MLOC_20815 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.028816.06516.13390
LEAShoots from the seedlings (10 cm shoot stage)21.751918.920312.80760
INF1Young developing inflorescences (5mm)3.802794.640354.672250
INF2Developing inflorescences (1-1.5 cm)4.304774.552965.69630
ROORoots from the seedlings (10 cm shoot stage)13.885621.372515.5870
NODDeveloping tillers at six leaf stage, 3rd internode10.929316.66468.656930
CAR5Developing grain, bracts removed (5 DPA)28.133826.949727.69550
CAR15Developing grain, bracts removed (15 DPA)5.633377.829286.171960



CDS Structure of MLOC_20815






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20815.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20815.2CUST_9910_PI427708080AvailableNonecontig_1591906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03610.3 -2 0.0 1063 580/649 (89%) 13103.m12918 protein 1,3-beta-glucan synthase component domain containing protein, expressed
TAIR PP10 AT5G13000.1 -2 0.0 962 513/650 (79%) | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955