MLOC_20753 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.566114.82317.35610.8537
LEAShoots from the seedlings (10 cm shoot stage)13.02999.148289.038186.38273
INF1Young developing inflorescences (5mm)17.392918.057222.359.52066
INF2Developing inflorescences (1-1.5 cm)16.038718.748718.588812.8342
ROORoots from the seedlings (10 cm shoot stage)8.9265413.965712.71489.48834
NODDeveloping tillers at six leaf stage, 3rd internode10.50089.46110.344623.9993
CAR5Developing grain, bracts removed (5 DPA)18.688920.293620.080211.8152
CAR15Developing grain, bracts removed (15 DPA)4.659613.616425.202176.18597



CDS Structure of MLOC_20753






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20753.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20753.1NoneAvailableAvailablecontig_1591650 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16970.3 +2 4e-38 151 70/86 (81%) 13101.m01902 protein glucosidase II beta subunit-like domain containing protein, expressed
TAIR PP10 AT5G56360.1 +2 9e-32 132 60/87 (69%) | Symbols: PSL4 | calmodulin-binding protein | chr5:22823586-22827950 REVERSE LENGTH=647