MLOC_2075 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 124.865 | 134.745 | 128.89 | 163.158 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 98.5878 | 63.3783 | 49.7428 | 70.564 |
| INF1 | Young developing inflorescences (5mm) | 90.387 | 79.1265 | 72.6288 | 79.9146 |
| INF2 | Developing inflorescences (1-1.5 cm) | 60.1824 | 75.1651 | 71.8933 | 91.4844 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 101.294 | 112.357 | 107.406 | 178.881 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 45.343 | 39.8107 | 26.571 | 157.931 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 186.758 | 143.992 | 119.033 | 174.425 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 82.1538 | 90.5055 | 95.7225 | 236.561 |
CDS Structure of MLOC_2075
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2075.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g32950.1 |
+1 |
0.0 |
774 |
446/515 (87%) |
13104.m03171 protein calreticulin precursor protein, putative, expressed |
| TAIR PP10 |
AT5G61790.1 |
+1 |
0.0 |
633 |
358/475 (75%) |
| Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827394-24829642 REVERSE LENGTH=530 |
