MLOC_20735 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.67588.5105811.98598.44117
LEAShoots from the seedlings (10 cm shoot stage)8.732456.195039.815245.83744
INF1Young developing inflorescences (5mm)8.206839.068459.816195.72247
INF2Developing inflorescences (1-1.5 cm)5.400826.247058.396185.39307
ROORoots from the seedlings (10 cm shoot stage)11.944110.935712.795810.5445
NODDeveloping tillers at six leaf stage, 3rd internode11.147311.095511.152628.9528
CAR5Developing grain, bracts removed (5 DPA)6.496326.844437.728885.07166
CAR15Developing grain, bracts removed (15 DPA)1.731911.009972.148472.73726



CDS Structure of MLOC_20735






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20735.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20735.2NoneAvailableAvailablecontig_1591584 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41390.3 -3 4e-41 149 67/75 (89%) 13106.m04323 protein N-terminal asparagine amidohydrolase, putative, expressed
TAIR PP10 AT2G44420.1 -3 2e-16 80 35/68 (51%) protein N-terminal asparagine amidohydrolase family protein | chr2:18330568-18332696 FORWARD LENGTH=347