MLOC_20686 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.612178.72667.494687.29465
LEAShoots from the seedlings (10 cm shoot stage)13.322112.637712.11089.66438
INF1Young developing inflorescences (5mm)9.748028.5094210.32258.11764
INF2Developing inflorescences (1-1.5 cm)3.730376.580778.103156.67261
ROORoots from the seedlings (10 cm shoot stage)7.730959.7116512.026910.0286
NODDeveloping tillers at six leaf stage, 3rd internode8.767725.0119626.866923.7249
CAR5Developing grain, bracts removed (5 DPA)5.295017.883747.820126.99203
CAR15Developing grain, bracts removed (15 DPA)0.3534940.7101291.033491.676



CDS Structure of MLOC_20686






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20686.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20686.1CUST_11666_PI427708083AvailableAvailablecontig_1591347 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g32230.1 +3 1e-45 160 79/86 (92%) 13105.m03315 protein expressed protein
TAIR PP10 AT5G12470.1 +3 2e-32 124 56/83 (67%) Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386