- Predicted Gene MLOC_20685
MLOC_20685 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 26.7028 | 28.154 | 26.3493 | 30.0298 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.79 | 16.5359 | 12.8934 | 12.4628 |
INF1 | Young developing inflorescences (5mm) | 55.782 | 52.9213 | 53.9594 | 52.0364 |
INF2 | Developing inflorescences (1-1.5 cm) | 52.3391 | 49.4287 | 50.0216 | 62.1483 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.84 | 20.0336 | 32.1642 | 27.4227 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.162 | 4.3282 | 6.62992 | 14.1201 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.0802 | 23.6118 | 22.6638 | 24.9564 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.14072 | 5.07149 | 4.91312 | 13.4989 |
CDS Structure of MLOC_20685
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20685.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g55740.1 |
-2 |
8e-15 |
73 |
47/73 (64%) |
13101.m05879 protein OsRhmbd4 - Putative Rhomboid homologue, expressed |
TAIR PP10 | None | - | - | - | - | - |