MLOC_20648 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.739225.52320.27140
LEAShoots from the seedlings (10 cm shoot stage)27.024518.673614.51530
INF1Young developing inflorescences (5mm)92.160862.07459.56050
INF2Developing inflorescences (1-1.5 cm)55.472746.197545.41540
ROORoots from the seedlings (10 cm shoot stage)18.561527.102922.22350
NODDeveloping tillers at six leaf stage, 3rd internode10.72532.118082.155740
CAR5Developing grain, bracts removed (5 DPA)39.749133.008429.02810
CAR15Developing grain, bracts removed (15 DPA)3.334611.703992.517140



CDS Structure of MLOC_20648






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356388
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356388CUST_23901_PI427708080NoneNoneNone
MLOC_20648.1NoneAvailableNonecontig_1591108 (Mapped)
MLOC_36116.1NoneAvailableNonecontig_2536091 (Not mapped)
MLOC_78240.1NoneAvailableNonecontig_7932 (Mapped)
MLOC_78241.2NoneAvailableAvailablecontig_7932 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----