MLOC_2064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000.28939
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000.208407
NODDeveloping tillers at six leaf stage, 3rd internode1.74264.18688019.8801
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_2064






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2064.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2064.1CUST_2960_PI427708083AvailableAvailablecontig_118348 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g28330.5 +2 3e-36 129 65/73 (89%) 13103.m03309 protein sucrose synthase, putative, expressed
TAIR PP10 AT4G02280.1 +2 3e-29 110 54/73 (74%) | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:995166-998719 FORWARD LENGTH=809