MLOC_20633 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.45356.121549.350028.51359
LEAShoots from the seedlings (10 cm shoot stage)5.704433.915576.414474.44774
INF1Young developing inflorescences (5mm)2.715331.588363.451872.15487
INF2Developing inflorescences (1-1.5 cm)0.867651.600691.973571.61623
ROORoots from the seedlings (10 cm shoot stage)9.30324.605145.035226.21821
NODDeveloping tillers at six leaf stage, 3rd internode20.482925.529754.215388.3116
CAR5Developing grain, bracts removed (5 DPA)6.203145.220993.600955.00671
CAR15Developing grain, bracts removed (15 DPA)1.416691.381591.418953.3674



CDS Structure of MLOC_20633






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20633.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20633.1CUST_2959_PI427708083AvailableAvailablecontig_1591009 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g44210.1 +3 4e-27 103 54/64 (84%) 13108.m04793 protein dihydroneopterin aldolase, putative, expressed
TAIR PP10 AT5G62980.1 +3 3e-15 71 40/62 (65%) | Symbols: FOLB2 | Dihydroneopterin aldolase | chr5:25276384-25277083 FORWARD LENGTH=131