MLOC_20614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.218120.09204700.159284
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.6639211.72141.988121.84546
CAR15Developing grain, bracts removed (15 DPA)33.203624.505727.564878.508



CDS Structure of MLOC_20614






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20614.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367631NoneNoneNoneNone
AK373484NoneNoneNoneNone
MLOC_20614.2CUST_1909_PI427708080AvailableAvailablecontig_159087 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54520.2 +1 2e-150 427 206/252 (82%) 13101.m05730 protein DUF1264 domain containing protein, putative, expressed
TAIR PP10 AT5G45690.1 +1 2e-101 301 139/248 (56%) Protein of unknown function (DUF1264) | chr5:18535139-18536259 REVERSE LENGTH=247