- Predicted Gene MLOC_20605
MLOC_20605 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20605_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20605_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.977 | 13.615 | 15.4282 | 9.23097 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.7107 | 13.0534 | 13.3663 | 9.74332 |
INF1 | Young developing inflorescences (5mm) | 17.556 | 16.8186 | 20.6389 | 11.0127 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5984 | 16.8331 | 15.2499 | 14.0538 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.4893 | 14.1708 | 12.0105 | 11.7971 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.0095 | 13.9153 | 20.6655 | 37.1223 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.1419 | 17.5298 | 19.8061 | 13.2037 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.3403 | 10.4723 | 12.5886 | 17.7596 |
CDS Structure of MLOC_20605
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20605.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g30020.2 |
-3 |
2e-158 |
472 |
230/258 (89%) |
13112.m03058 protein cyclin-T1-4, putative, expressed |
TAIR PP10 |
AT4G19600.1 |
-3 |
2e-137 |
417 |
200/227 (88%) |
| Symbols: CYCT1;4 | Cyclin family protein | chr4:10673619-10676532 FORWARD LENGTH=541 |