MLOC_2059 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1359450.2071580.5783850.325104
LEAShoots from the seedlings (10 cm shoot stage)0.2647940.1101420.04603890.134544
INF1Young developing inflorescences (5mm)1.308782.054831.682321.55757
INF2Developing inflorescences (1-1.5 cm)0.4341520.2347390.2391250.354043
ROORoots from the seedlings (10 cm shoot stage)0.2334690.094905200.241732
NODDeveloping tillers at six leaf stage, 3rd internode2.00660.8102860.4708752.94647
CAR5Developing grain, bracts removed (5 DPA)0.5827470.7969181.091080.925808
CAR15Developing grain, bracts removed (15 DPA)1.392681.180252.240343.74618



CDS Structure of MLOC_2059






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2059.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2059.2CUST_9892_PI427708080AvailableAvailablecontig_118293 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50700.1 +2 1e-155 463 244/285 (86%) 13101.m05279 protein dehydrin family protein, expressed
TAIR PP10 AT4G39150.2 +2 2e-120 361 186/286 (65%) DNAJ heat shock N-terminal domain-containing protein | chr4:18233651-18235740 REVERSE LENGTH=345