MLOC_2059 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_2059_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_2059_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.135945 | 0.207158 | 0.578385 | 0.325104 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.264794 | 0.110142 | 0.0460389 | 0.134544 |
INF1 | Young developing inflorescences (5mm) | 1.30878 | 2.05483 | 1.68232 | 1.55757 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.434152 | 0.234739 | 0.239125 | 0.354043 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.233469 | 0.0949052 | 0 | 0.241732 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.0066 | 0.810286 | 0.470875 | 2.94647 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.582747 | 0.796918 | 1.09108 | 0.925808 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.39268 | 1.18025 | 2.24034 | 3.74618 |
CDS Structure of MLOC_2059
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2059.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g50700.1 |
+2 |
1e-155 |
463 |
244/285 (86%) |
13101.m05279 protein dehydrin family protein, expressed |
TAIR PP10 |
AT4G39150.2 |
+2 |
2e-120 |
361 |
186/286 (65%) |
DNAJ heat shock N-terminal domain-containing protein | chr4:18233651-18235740 REVERSE LENGTH=345 |